Savant Genome Browser

View genome data with this tool.
Download

Savant Genome Browser Ranking & Summary

Advertisement

  • Rating:
  • License:
  • Freeware
  • Publisher Name:
  • Computational Biology Lab
  • File Size:
  • 33.4 MB

Savant Genome Browser Tags


Savant Genome Browser Description

Savant Genome Browser is a handy, easy to use, Java based visualization application specially designed for genomic data. It was primarily developed for visualizing high throughput (aka next generation) sequencing data, although it can be used to visualize virtually any genome-based sequence, point, interval, or continuous dataset. Main features: FASTA, BED, SAM/BAM, WIG, GFF, and virtually any tab delimited text file containing positional annotations Fast data access Scalable to very large input files Small memory footprint Zooming, panning, and seeking using range controls or keyboard and mouse Dockable modules supporting show/hide, rearrangement, maximize, float, close Compact view of sequence, point, interval, and continuous tracks Multiple display modes for specific track types Works on Windows, Linux, Mac, and any other platform having support for Java Virtual Machine Plugin framework allows access to data, tracks, and UI for extensive customization Bookmarking of locations Track locking Novel representation of paired-end reads making structural variations easy to identify


Savant Genome Browser Related Software